biocurator.org


 biocurator homepage

 Upcoming
  IBCM Asilomar, Dec 2005

 Past Meetings
  Philadelphia, Oct 2004
  GMOD Boston 2004
  Carnegie, March 2003
  Milwaukee, Oct 2003
  Eugene, Oct 2004

 Mailing List

 Publications

 MOD sites:
  Dictybase
  GrainGenes
  FlyBase
  GiardiaDB
  Gramene
  MaizeGDB
  MetaCyc
  MGI
  RGD
  SGD
  SGN
  TAIR
  TIGR
  Wormbase
  ZFIN
  CGD

 Related Sites
  GMOD

 

Previous Related Meetings

GMOD meeting: Date: April 26-28 2004.
Meeting Agenda: now available on GMOD site.
Sequence Annotation Focus
The next Generic Model Organism Database meeting will take place at the Sheraton Commander Hotel in Cambridge, MA (Harvard Square) on April 26-28. This meeting will be a combined developer/curator meeting, with workshops for both groups. For curators, there will be a day and a half workshop focused on sequence annotation (including "Bring your own genome"). For developers, there will be a workshop focusing on installing and using the current release of the "GMOD suite." A full agenda will be available soon.

The first 1/2 day of the sequence annotation workshop is for discussions of issues that face genome sequence annotators, including balancing computational and manual annotation, consistency and SOPs for annotation, and words of wisdom from those who have annotated genomes (e.g. common pitfalls).

The second full day of the sequence annotation workshop will be a hands-on training and feedback session using the Apollo genome annotation tool. Participants will need to bring a laptop with wireless card, Apollo installed, and their sequence with computational results to annotate. Tutorials will help users get the most of the advanced editing features in the tool, and Apollo developers will be on hand to get feedback from users about features to add in the future.

GMOD has arranged for a group rate on rooms at the Sheraton ($135/night). In order to get the group rate, you must make your reservations by *March 26* by calling 1-888-627-7121 and telling the reservation agent that the reservation is for the GMOD conference.

If you are interested in attending, please contact GMOD Coordinator Scott Cain at cain@cshl.org.

GO Annotation workshop:
Date: likely April or May, perhaps into June, lasting 5 days
Location: Caltech Details: Contact Wormbase (Paul Sternberg?) or Mike Cherry for more info

Dag-Edit workshop:
Date: May 26-28, 2004
Details: To be held at Walnut Creek, CA with the Joint Genome Institute. John Richter is the organizer.

GO Annotation Camp:
Date: June 13-17, 2004
Details: Dept. of Genetics, University of Cambridge, UK.
Download Report in word format.

Genome Informatics Meeting
Date: September 22 - 26, 2004
Location: Hinxton, United Kingdom
Organizers: Lincoln Stein, Ewan Birney and Suzanna Lewis. More information: Meeting website.


Pages maintained by Julie Tacklind.